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  • 1

    Software

    Author(s):
    Ryan Kennedy
    Abstract:

    Transposable elements (TEs) are a type of repetitive sequence that have been found in nearly all eukaryotic genomes. First discovered and analyzed by McClintock in the 1950s, TEs have the ability to move about and replicate within a genome. Due to their mobile and replicative nature, TEs often occupy large portions of genomes. This prevalence of TEs poses a major difficulty in sequence assembly, as repeat regions are prone to misassembly. TEs can impact host genomes in a number of ways. They …

    Date Created:
    2010-11-01
    Record Visibility:
    Public
    Resource Type
    Software
  • Creator(s):
    Varun Mannam
    Description:

    SPIE Photonics West-2021 poster presentation about the FLIM denisoing.

    Date Created:
    2021-02-12
    Record Visibility:
    Public
  • Author(s):
    Varun Mannam
    Abstract:

    Fluorescence lifetime imaging microscopy (FLIM) is a powerful technique in biomedical research that uses the fluorophore decay rate to provide additional contrast in fluorescence microscopy. However, at present, the calculation, analysis, and interpretation of FLIM is a complex, slow, and computationally expensive process. Machine learning (ML) techniques are well suited to extract and interpret measurements from multi-dimensional FLIM data sets with substantial improvement in speed over conv…

    Date Published:
    2020-09
    Record Visibility:
    Public
  • Creator(s):
    Varun Mannam
    Description:

    Summer session IBM research interns poster presentations. (2019) Place: IBM T.J. Watson Research Center, Yorktown Heights, New York, NY.

    Date Created:
    2019-08-09
    Record Visibility:
    Public
  • Creator(s):
    Varun Mannam
    Description:

    The vagus nerve is a mixed nerve containing sensory and motor fibers that carry signals between the brain and body. Selective targeting of different fiber subsets is a major goal of neuromodulation strategies, including vagus nerve stimulation (VNS). Improved methods for identifying and quantifying specific fiber types within the vagus nerve (such as A, B, and C-fibers) would provide important insights for selective neuromodulation at the ultrastructural level and enable more realistic in-sil…

    Date Created:
    2021-11-05
    Record Visibility:
    Public
  • Author(s):
    Eduardo Fernando Mello, Peter Bauer
    Abstract:

    http://www.energy-proceedings.org/on-energy-optimal-speed-trajectories-in-urban-traffic-implementation-options/

    Realization methods for energy optimal urban driving are the prime focus of this paper. Insights into the real-time generation of such trajectories as well as “in traffic” methods for their execution are provided. This includes the usage of piecewise linear approximations of typical urban speed profiles, urban platooning, filtering of trajectories, and modifying initial acceleratio…

    Date Published:
    2020
    Record Visibility:
    Public
  • Author(s):
    Angela Chesler, Tracy Kijewski-Correa, Debra Javeline
    Abstract:

    As climate changes, coastal homeowners are potentially crucial actors in reducing the risks to property and human life from rising seas and increased hurricane activity. Absent strict, enforceable regulations mandating retrofitting of existing homes or major changes in homeowner insurance requirements, coastal resilience in a changing climate will largely reflect private, voluntary decisions of millions of individuals. However, research is scarce on the current risk level of U.S. coastal home…

    Date Created:
    2021-10-07
    Record Visibility:
    Public
    Resource Type
    Document
  • Author(s):
    Tracy Kijewski-Correa, Debra Javeline, Angela Chesler
    Abstract:

    As climate changes, coastal homeowners are potentially crucial actors in reducing the risks to property and human life from rising seas and increased hurricane activity. Absent strict, enforceable regulations mandating retrofitting of existing homes or major changes in homeowner insurance requirements, coastal resilience in a changing climate will largely reflect private, voluntary decisions of millions of individuals. However, research is scarce on the current risk level of U.S. coastal home…

    Date Created:
    2021-10-07
    Record Visibility:
    Public
    Resource Type
    Document
  • Author:
    Sreya Banerjee
    Advisory Committee:
    Walter J. Scheirer
    Degree Area:
    Computer Science and Engineering
    Degree:
    Doctor of Philosophy
    Defense Date:
    2021-09-14
    Record Visibility:
    Public
  • Author:
    Poorna Talkad Sukumar
    Advisory Committee:
    David Hachen, Aaron Striegel, Ronald Metoyer, Tim Weninger, Chaoli Wang
    Degree Area:
    Computer Science and Engineering
    Degree:
    Doctor of Philosophy
    Defense Date:
    2021-08-16
    Record Visibility:
    Public
  • Author:
    Junchi Lu
    Advisory Committee:
    Anthony J. Hoffman, Scott Howard, Thomas O'Sullivan, David Burghoff
    Degree Area:
    Electrical Engineering
    Degree:
    Doctor of Philosophy
    Defense Date:
    2021-09-07
    Record Visibility:
    Public
  • Author:
    John R. Hoffman
    Advisory Committee:
    William A. Phillip
    Degree Area:
    Chemical and Biomolecular Engineering
    Degree:
    Doctor of Philosophy
    Defense Date:
    2021-08-18
    Record Visibility:
    Public