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  • Creators(s):
    Jennifer Tank
    Description:

    This dataset contains data from 17 stream 15N-NH4 tracer addition experiments conducted globally, with data partitioned by autotrophic uptake compartments (i.e., epilithic biofilm, filamentous algae, bryophytes/macrophytes) and heterotrophic uptake compartments (i.e., leaves, small wood, and fine particles) that comprise the base of stream food webs. The dataset includes compartmental data on N biomass and uptake as well as other physiochemical variable that describe conditions in each stream.

    Date Created:
    2017-09-12
  • Author:
    Stephanie A Freed
    Advisory Committee:
    Joseph O'Tousa
    Degree Area:
    Biological Sciences
    Degree:
    Master of Science
    Defense Date:
    2016-06-06
  • Author:
    Jishan Liao
    Advisory Committee:
    Nitesh Chawla, Jessica Hellmann, Jason McLachlan
    Degree Area:
    Biological Sciences
    Degree:
    Master of Science
  • Creators(s):
    Alexander Vyushkov
    Description:

    Files necessary to repeat OpenMalaria VecNet experiment using CCL Umbrella

    Date Created:
    2015-10-08
  • Author(s):
    David Severson, Anastasia N. Naumenko, Vladimir A. Timoshevskiy, Nicholas A. Kinney, Alina A. Kokhanenko, Becky S. deBruyn, Diane D. Lovin, Vladimir N. Stegniy, Igor V. Sharakhov, Maria V. Sharakhova
    Abstract:

    The genome assembly of southern house mosquito Cx. quinquefasciatus is represented by a high number of supercontigs with no order or orientation on the chromosomes. Although cytogenetic maps for the polytene chromosomes of this mosquito have been developed, their utilization for the genome mapping remains difficult because of the low number of high-quality spreads in chromosome preparations. Therefore, a simple and robust mitotic-chromosome-based approach for the genome mapping of Cx. quinque…

  • Author(s):
    David Severson, Daniel Lawson, Peter Arensburger, Peter Atkinson, Nora J. Besansky, Robert V. Bruggner, Ryan Butler, Kathryn S. Campbell, George K. Christophides, Scott Christley, Emmanuel Dialynas, Martin Hammond, Catherine A. Hill, Nathan Konopinski, Neil F. Lobo, Robert M. MacCallum, Greg Madey, Karine Megy, Jason Meyer, Seth Redmond, Eric O. Stinson, Pantelis Topalis, Ewan Birney, William M. Gelbart, Fotis C. Kafatos, Christos Louis, Frank H. Collins
    Abstract:

    VectorBase (http://www.vectorbase.org) is an NIAID-funded Bioinformatic Resource Center focused on invertebrate vectors of human pathogens. VectorBase annotates and curates vector genomes providing a web accessible integrated resource for the research community. Currently, VectorBase contains genome information for three mosquito species: Aedes aegypti, Anopheles gambiae and Culex quinquefasciatus, a body louse Pediculus humanus and a tick species Ixodes scapularis. Since our last report Vect…

  • Author(s):
    David Severson, Susanta K. Behura, Consuelo Gomez-Machorro, Brent W. Harker, Becky deBruyn, Diane D. Lovin, Ryan R. Hemme, Akio Mori, Jeanne Romero-Severson
    Abstract:

    Dengue virus is primarily transmitted by Aedes aegypti mosquitoes. Control of the vector mosquito is the major practice to prevent dengue. However, it is not well known how the virus can infect some mosquito strains but fail to do so with other refractory strains. To address that question, we conducted whole genome microarray based gene expression studies between susceptible and refractory strains of A. aegypti to identify gene expression patterns following challenge with dengue virus. Our an…

  • Author:
    Ashley Nicole Ferreira
    Advisory Committee:
    Zainulabeuddin Syed, Sunny Boyd, Patrick L. Sheets
    Degree Area:
    Biological Sciences
    Degree:
    MS
    Defense Date:
    2015-04-03
  • Creator(s):
    Natalie Meyers, Donald Brower, Michelle Barker
    Description:

    Vector-Borne Disease Network (VecNet)’s digital library provides part of a common analytical framework to assemble data on malaria transmission and make it accessible for the purposes of computational modeling. This poster-paper presented at IEEE/ACM Joint Conference on Digital Libraries, Sept. 2014 (DOI:10.1109/JCDL.2014.6970212) reports on VecNet digital library development, key decisions related to metadata standards, design, the central role of metadata and authority files in its architec…

    Date Created:
    2014-12-16
  • Author:
    Sarah Gillian Winikoff
    Advisory Committee:
    Jennifer L. Tank, Gary A. Lamberti, Stuart Jones
    Degree Area:
    Biological Sciences
    Degree:
    MS
    Defense Date:
    2014-08-05
  • Author:
    Robert Thomas Davis
    Advisory Committee:
    Dr. Stuart Jones, Dr. Gary Lamberti, Dr. Jennifer Tank
    Degree Area:
    Biological Sciences
    Degree:
    MS
    Defense Date:
    2014-06-05
  • Author:
    Shayna Anne Sura
    Advisory Committee:
    Gary Belovsky
    Degree Area:
    Biological Sciences
    Degree:
    MS
    Defense Date:
    2014-05-06