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  • Creator(s):
    Varun Mannam
    Description:

    We created a small dataset to validate the lifetime denoising using the trained Noise2Noise-NBN model - the Fluorescence Microscopy Lifetime Denoising (FMLD) dataset - that is dedicated to perform the lifetime denoising from the noisy (raw) lifetime images.

    The dataset consists of 50 real fluorescence microscopy images obtained with custom-built two-photon microscope and representative fixed BPAE cell (F36924) samples. We use all 50 images for testing/inference. These images are captured wi…

    Date Created:
    2020-01-01
    Record Visibility:
    Public
  • Creator(s):
    Varun Mannam
    Description:

    We created a dataset - the Lifetime From Intensity (LFI) dataset - that is dedicated to estimate the lifetime from intensity images. The dataset consists of 156 real fluorescence microscopy images obtained with custom-built two-photon microscope and representative biological zebrafish samples. We use 140 images for training and 16 images for testing. These images are captured with 2 different excitation wavelengths (800 and 920 nm) and different power levels (5 mW and 8 mW).

    Date Created:
    2019-08-13
    Record Visibility:
    Public
  • Creator(s):
    Varun Mannam, Yide Zhang, Yinhao Zhu, Scott Howard
    Description:

    We created a dataset - the Fluorescence Microscopy Denoising (FMD) dataset - that is dedicated to Poisson-Gaussian denoising. The dataset consists of 12,000 real fluorescence microscopy images obtained with commercial confocal, two-photon, and wide-field microscopes and representative biological samples such as BPAE cells, zebrafish, and mouse brain tissues. We use image averaging to effectively obtain ground truth images and 60,000 noisy images with different noise levels.

    Date Created:
    2019-04-21
    Record Visibility:
    Public
  • Creator(s):
    Christianos Burlotos
    Description:

    This multilayered spreadsheet is used to assist aspiring homeowners design their home from a pre-set list of options for floorplans, finishes, fixtures, and basic services. It also rapidly calculates an estimated total cost for the structure as well as a corresponding monthly payment amount. This allows the design process to be performed iteratively, giving families autonomy in the design of their own home, the chance to consider a variety of options and combinations, and the immediate knowle…

    Date Created:
    2020-07-20
    Record Visibility:
    Public
  • Creator(s):
    Christianos Burlotos
    Description:

    This tool calculates the design loads on a reinforced concrete special moment frame with a concrete slab roof, determines force and moment demands through an approximate portal frame analysis, assesses load combinations, evaluates the capacity of members compared to the demands, and approximates the cost of needed construction materials. It was produced by MSCE student Christianos Burlotos in order to parametrically assess frames to determine the best-fit frame for single-family homes in Leog…

    Date Created:
    2020-07-20
    Record Visibility:
    Public
  • Creator(s):
    Christianos Burlotos
    Description:

    This tool calculates the design loads on a reinforced concrete special moment frame with a corrugated galvanized iron roof, determines force and moment demands through an approximate portal frame analysis, assesses load combinations, evaluates the capacity of members compared to the demands, and approximates the cost of needed construction materials. It was produced by MSCE student Christianos Burlotos in order to parametrically assess frames to determine the best-fit frame for single-family …

    Date Created:
    2020-07-20
    Record Visibility:
    Public
  • Creator(s):
    Mark Suhovecky
    Description:

    This dataset contains the raw and sanitized data about Curate privacy settings, collected April 2nd, 2020 from the CurateND anotation test server, along with the R code used to convert the raw data to the sanitized data. The data is being used as part of INF 7491, a graduate-level data analysis course held Winter Semester 2020 at Wayne State University.

    The raw data consists of a RDF entries for every attribute in every CurateND pid, stored as RDF triples. The processed data is stored a an …

    Date Created:
    2020-03-24
    Record Visibility:
    Public
  • Creator(s):
    Glen L. Niebur, Kimberly J. Curtis
    Description:

    Segmented computed tomography images of bone samples in Scanco AIM format (read with ImageJ): xxxx_seg.aim VTK format images of CFD results showing shear stress in the marrow (variable s0) (read with Python or other VTK compatible software): xxxxx.vtk Excel spreadsheet with gene expression data: xxx.xlsx

    Date Created:
    2019-04-24
    Record Visibility:
    Public
  • Creator(s):
    David H Richter, Anne E Dempsey
    Description:

    Data for the reproduction of figures found in the paper Turbulent transport of spray droplets in the vicinity of moving surface waves written by David Richter et al.

    Included in this data set is: Spray Droplet Concentration, normalized velocity, and surf. Joint probability distributions of the droplet ejection location with (a) the droplet death location, (b) the maximum height reached by the droplet during its lifetime, and © the droplet lifetime for Cases d10 and d100.

    Date Created:
    2019-03-29
    Record Visibility:
    Public
  • Creator(s):
    Kevin Roche
    Description:

    This dataset is associated with the manuscript titled, “Effects of Turbulent Hyporheic Mixing on Reach-Scale Transport,” which is presently in review at Water Resources Research.

    Date Created:
    2018-05-29
    Record Visibility:
    Public
  • Creator(s):
    Kevin Roche
    Description:

    This record contains all data used in the experimental study, “Modeling benthic vs. hyporheic uptake in unshaded streams with varying substrates,” published in the journal JGR-Biogeosciences.

    Date Created:
    2018-05-29
    Record Visibility:
    Public
  • Creator(s):
    Sunny Boyd
    Description:

    Mate choice strategies in a spatially-explicit model environment

    Giordano B. S. Ferreira1, Matthias Scheutz1, and Sunny K. Boyd2 1Department of Computer Science, Tufts University, Medford, MA 02155, USA Matthias.scheutz@tufts.edu and Giordano.Ferreira@tufts.edu 2Department of Biological Sciences, University of Notre Dame, Notre Dame, IN 46556, USA Boyd.1@nd.edu (Corresponding author; phone: 574-631-5021; fax: 574-631-7413)

    Keywords: mate choice, decision-making, agent-based modeling, f…

    Date Created:
    2017-12-14
    Record Visibility:
    Public